Install-tool-deps

Tool to install tool dependencies on a Galaxy instance.

Usage

usage: install-tool-deps [-h] [-v] [-g GALAXY] [-u USER] [-p PASSWORD]
                         [-a API_KEY] [-t [TOOL ...]] [-i [ID ...]]

Named Arguments

-t, --tool

Path to a tool file, tool_conf file, or yaml file containing a sequence of tool ids

-i, --id

Space-separated list of tool ids

General options

-v, --verbose

Increase output verbosity.

Default: False

Galaxy connection

-g, --galaxy

Target Galaxy instance URL/IP address

Default: “http://localhost:8080”

-u, --user

Galaxy user email address

-p, --password

Password for the Galaxy user

-a, --api-key, --api_key

Galaxy admin user API key (required if not defined in the tools list file)