Workflow-install

Tool to install workflows on a Galaxy instance.

Usage

usage: workflow-install [-h] [-v] [-g GALAXY] [-u USER] [-p PASSWORD]
                        [-a API_KEY] -w WORKFLOW_PATH [--publish-workflows]

Named Arguments

-w, --workflow-path, --workflow_path

Path to a workflow file or a directory with multiple workflow files ending with “.ga”

--publish-workflows, --publish_workflows

Flag to publish all imported workflows, so that they are viewable by other users

Default: False

General options

-v, --verbose

Increase output verbosity.

Default: False

Galaxy connection

-g, --galaxy

Target Galaxy instance URL/IP address

Default: “http://localhost:8080”

-u, --user

Galaxy user email address

-p, --password

Password for the Galaxy user

-a, --api-key, --api_key

Galaxy admin user API key (required if not defined in the tools list file)